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dc.contributor.authorAlthaus, Franziska
dc.contributor.authorHill, Nicole
dc.contributor.authorFerrari, Renata
dc.contributor.authorEdwards, Luke
dc.contributor.authorPrzeslawski, Rachel
dc.contributor.authorSchönberg, Christine H. L.
dc.contributor.authorStuart-Smith, Rick
dc.contributor.authorBarrett, Neville
dc.contributor.authorEdgar, Graham
dc.contributor.authorColquhoun, Jamie
dc.contributor.authorTran, Maggie
dc.contributor.authorJordan, Alan
dc.contributor.authorRees, Tony
dc.contributor.authorGowlett-Holmes, Karen
dc.date.accessioned2018-03-07T22:35:06Z
dc.date.available2018-03-07T22:35:06Z
dc.date.issued2015
dc.identifier.citationAlthaus F., Hill, N., Ferrari, R., Edwards, L., Przeslawski, R., Schönberg, C.H.L., Stuart-Smith, R., Barrett, N., Edgar, G., Colquhoun, J., Tran, M., Jordan, A., Rees, T., Gowlett-Holmes, K. (2015) A Standardised Vocabulary for Identifying Benthic Biota and Substrata from Underwater Imagery: The CATAMI Classification Scheme. PLoS ONE 10(10), e0141039. DOI:10.1371/journal.pone.0141039en_US
dc.identifier.urihttp://hdl.handle.net/11329/406
dc.identifier.urihttps://doi.org/10.25607/OBP-1508
dc.description.abstractImagery collected by still and video cameras is an increasingly important tool for minimal impact, repeatable observations in the marine environment. Data generated from imagery includes identification, annotation and quantification of biological subjects and environmental features within an image. To be long-lived and useful beyond their project-specific initial purpose, and to maximize their utility across studies and disciplines, marine imagery data should use a standardised vocabulary of defined terms. This would enable the compilation of regional, national and/or global data sets from multiple sources, contributing to broadscale management studies and development of automated annotation algorithms. The classification scheme developed under the Collaborative and Automated Tools for Analysis of Marine Imagery (CATAMI) project provides such a vocabulary. The CATAMI classification scheme introduces Australian-wide acknowledged, standardised terminology for annotating benthic substrates and biota in marine imagery. It combines coarse-level taxonomy and morphology, and is a flexible, hierarchical classification that bridges the gap between habitat/ biotope characterisation and taxonomy, acknowledging limitations when describing biological taxa through imagery. It is fully described, documented, and maintained through curated online databases, and can be applied across benthic image collection methods, annotation platforms and scoring methods. Following release in 2013, the CATAMI classification scheme was taken up by a wide variety of users, including government, academia and industry. This rapid acceptance highlights the scheme’s utility and the potential to facilitate broad-scale multidisciplinary studies of marine ecosystems when applied globally. Here we present the CATAMI classification scheme, describe its conception and features, and discuss its utility and the opportunities as well as challenges arising from its use.en_US
dc.language.isoenen_US
dc.rightsAttribution 3.0 IGO*
dc.rights.urihttp://creativecommons.org/licenses/by/3.0/igo/*
dc.subject.otherImageryen_US
dc.subject.otherTaxonomyen_US
dc.subject.otherIdentificationen_US
dc.subject.otherControlled vocabulariesen_US
dc.subject.otherClassificationen_US
dc.subject.otherCollaborative and Automated Tools for Analysis of Marine Imagery (CATAMI)en_US
dc.subject.otherBenthos
dc.titleA Standardised Vocabulary for Identifying Benthic Biota and Substrata from Underwater Imagery: The CATAMI Classification Scheme.en_US
dc.typeJournal Contributionen_US
dc.description.refereedRefereeden_US
dc.format.pagerangee0141039, 18pp.en_US
dc.identifier.doi10.1371/journal.pone.0141039
dc.subject.parameterDisciplineParameter Discipline::Biological oceanography::Biota abundance, biomass and diversityen_US
dc.subject.parameterDisciplineParameter Discipline::Biological oceanography::Underwater photographyen_US
dc.subject.instrumentTypeInstrument Type Vocabulary::underwater camerasen_US
dc.subject.instrumentTypeInstrument Type Vocabulary::camerasen_US
dc.subject.dmProcessesData Management Practices::Ontology developmenten_US
dc.subject.dmProcessesData Management Practices::Controlled vocabulary developmenten_US
dc.bibliographicCitation.titlePLoS ONEen_US
dc.bibliographicCitation.volume10en_US
dc.bibliographicCitation.issue10en_US
dc.description.sdg14.2en_US
dc.description.eovPhytoplankton biomass and diversity; Zooplankton biomass and diversityen_US
dc.description.maturitylevelTRL 9 Actual system "mission proven" through successful mission operations (ground or space)en_US
dc.description.bptypeGuideen_US
dc.description.bptypeStandard Operating Procedure
obps.contact.contactemailRachel.Przeslawski@ga.gov.au
obps.resourceurl.publisherhttp://catami.github.io/catami-docs/CATAMI_Classification_Scheme_v1.4_Technical_document.pdf


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Except where otherwise noted, this item's license is described as Attribution 3.0 IGO