Browsing MBON Community Practices by Issue Date

Now showing items 1-11 of 11

    • Evaluation of Filtration and DNA Extraction Methods for Environmental DNA Biodiversity Assessments across Multiple Trophic Levels. 

      Djurhuus, Anni; Port, Jesse; Closek, Collin J.; Yamahara, Kevan M.; Romero-Maraccini, Ofelia; Walz, Kristine R.; Goldsmith, Dawn B.; Michisaki, Reiko; Breitbart, Mya; Boehm, Alexandria B.; Chavez, Francisco P. (2017)
      Metabarcoding of marine environmental DNA (eDNA), originating from tissue, cells, or extracellular DNA, offers the opportunity to survey the biological composition of communities across multiple trophic levels from a ...

    • Advancing Marine Biological Observations and Data Requirements of the Complementary Essential Ocean Variables (EOVs) and Essential Biodiversity Variables (EBVs) Frameworks. 

      Muller-Karger, Frank E.; Miloslavich, Patricia; Bax, Nicholas J.; Simmons, Samantha; Costello, Mark J.; Pinto, Isabel Sousa; Canonico, Gabrielle; Turner, Woody; Gill, Michael; Montes, Enrique; Best, Benjamin D.; Pearlman, Jay; Halpin, Patrick; Dunn, Daniel; Benson, Abigail; Martin, Corinne S.; Weatherdon, Lauren V.; Appeltans, Ward; Provoost, Pieter; Klein, Eduardo; Kelble, Christopher R.; Miller, Robert J.; Chavez, Francisco P.; Iken, Katrin; Chiba, Sanae; Obura, David; Navarro, Laetitia M.; Pereira, Henrique M.; Allain, Valerie; Batten, Sonia; Benedetti-Checchi, Lisandro; Duffy, J. Emmett; Kudela, Raphael M.; Rebelo, Lisa-Maria; Shin, Yunne; Geller, Gary (2018)
      Measurements of the status and trends of key indicators for the ocean and marine life are required to inform policy and management in the context of growing human uses of marine resources, coastal development, and climate ...

    • Satellite sensor requirements for monitoring essential biodiversity variables of coastal ecosystems. 

      Muller-Karger, Frank E.; Hestir, Erin; Ade, Christiana; Turpie, Kevin; Roberts, Dar A.; Siegel, David; Miller, Robert J.; Humm, David; Izenberg, Noam; Keller, Mary; Morgan, Frank; Frouin, Robert; Dekker, Arnold G.; Gardner, Royal; Goodman, James; Schaeffer, Blake; Franz, Bryan A.; Pahlevan, Nima; Mannino, Antonio G.; Concha, Javier A.; Ackleson, Steven G.; Cavanaugh, Kyle C.; Romanou, Anastasia; Tzortziou, Maria; Boss, Emmanuel S.; Pavlick, Ryan; Freeman, Anthony; Rousseaux, Cecile S.; Dunne, John; Long, Matthew C.; Klein, Eduardo; McKinley, Galen A.; Goes, Joachim; Letelier, Ricardo; Kavanaugh, Maria; Roffer, Mitchell; Bracher, Astrid; Arrigo, Kevin R.; Dierssen, Heidi; Zhang, Xiaodong; Davis, Frank W.; Best, Ben; Guralnick, Robert; Moisan, John; Sosik, Heidi M.; Kudela, Raphael; Mouw, Colleen B.; Barnard, Andrew H.; Palacios, Sherry; Roesler, Collin; Drakou, Evangelia G.; Appeltans, Ward; Jetz, Walter (2018)
      The biodiversity and high productivity of coastal terrestrial and aquatic habitats are the foundation for important benefits to human societies around the world. These globally distributed habitats need frequent and broad ...

    • Essential biodiversity variables for mapping and monitoring species populations. 

      Jetz, Walter; McGeoch, Melodie A.; Guralnick, Robert; Ferrier, Simon; Beck, Jan; Costello, Mark J.; Fernandez, Miguel; Geller, Gary N.; Keil, Petr; Merow, Cory; Meyer, Carsten; Muller-Karger, Frank E.; Pereira, Henrique M.; Regan, Eugenie C.; Schmeller, Dirk S.; Turak, Eren (2019)
      Species distributions and abundances are undergoing rapid changes worldwide. This highlights the significance of reliable, integrated information for guiding and assessing actions and policies aimed at managing and ...

    • Publishing DNA-derived data through biodiversity data platforms. version 1.0. 

      Andersson, A.F.; Bissett, A.; Finstad, A.G.; Fossøy, F.; Grosjean, M.; Hope, M.; Jeppesen, T.S.; Kõljalg, U.; Lundin, D.; Nilsson, R.N.; Prager, M.; Svenningsen, C.; Schigel, D. (GBIF Secretariat, Copehagen, Denmark, 2020)
      When genetic information is used to describe or classify a taxon, most users will foresee its use in the context of molecular ecology or phylogenetic research. It is important to realize that a sequence with coordinates ...

    • A Marine Biodiversity Observation Network for Genetic Monitoring of Hard-Bottom Communities (ARMS-MBON). 

      Obst, Matthias; Exter, Katrina; Allcock, A. Louise; Arvanitidis, Christos; Axberg, Alizz; Bustamante, Maria; Cancio, Ibon; Carreira-Flores, Diego; Chatzinikolaou, Eva; Chatzigeorgiou, Giorgos; Chrismas, Nathan; Clark, Melody S.; Comtet, Thierry; Dailianis, Thanos; Davies, Neil; Deneudt, Klaas; de Cerio, Oihane Diaz; Fortic, Ana; Gerovasileiou, Vasilis; Hablutzel, Pascal; Keklikoglou, Kleoniki; Kotoulas, Georgios; Lasota, Rafal; Leite, Barbara R.; Loisel, Stephane; Leveque, Laurent; Levy, Liraz; Malachowicz, Magdalena; Mavria, Borut; Meyer, Christopher; Mortelmans, Jonas; Norkko, Joanna; Pade, Nicolas; Power, Anne Marie; Ramsak, Andreja; Reiss, Henning; Solbakken, Jostein; Stoehr, Peter A.; Sundberg, Per; Thyrring, Jacob; Troncoso, Jesus S.; Viard, Frederique; Wenne, Roman; Yperifanou, Eleni Loanna; Zbawicka, Malgorzata; Pavloudi, Christina (2020)
      Marine hard-bottom communities are undergoing severe change under the influence of multiple drivers, notably climate change, extraction of natural resources, pollution and eutrophication, habitat degradation, and invasive ...

    • Optimizing large-scale biodiversity sampling effort: toward an unbalanced survey design. 

      Montes, Enrique; Lefcheck, Jonathan S.; Guerra-Castro, Edlin; Klein, Eduardo; Kavanaugh, Maria T.; de Azevedo Mazzuco, Ana Carolina; Bigatti, Gregorio; Cordeiro, Cesar A.M.M.; Simoes, Nuno; Macaya, Erasmo C.; Moity, Nicolas; Londoño-Cruz, Edgardo; Helmuth, Brian; Choi, Francis; Soto, Eulogio H.; Miloslavich, Patricia; Muller-Karger, Frank E. (2021)
      Acquiring marine biodiversity data is difficult, costly, and timeconsuming, making it challenging to understand the distribution and abundance of life in the ocean. Historically, approaches to biodiversity sampling over ...

    • Biological Observation Data Standardization - A Primer for Data Managers. 

      Benson, Abigail; LaScala-Gruenewald, Diana; McGuinn, Robert; Satterthwaite, Erin; Beaulieu, Stace; Biddle, Mathew; deWitt, Lynn; McKinzie, Megan; Montes, Enrique; Moustahfid, Hassan; Muller-Karger, Frank; Murray, Tylar; Van de Putte, Anton (ESIP Biological Data Standards Cluster, 2021)
      Lots of standards exist for use with biological data but navigating them can be difficult for data managers who are new to them. The Earth Science Information Partners (ESIP) Biological Data Standards Cluster developed ...

    • Webenizing Condition Reports: Communicating Data-Driven Ecosystem Indicators in a Visually Engaging and Interactive Online Platform. 

      Spector, Pike; Best, Ben; Raganathan, Jai; Murray, Tylar; Brown, Jennifer; Caldow, Chris; Canonico, Gabrielle; DeVogelaere, Andrew (NOAA, Office of National Marine Sanctuaries, Silver Springs, MD, 2021)
      The compilation and release of data-driven reports is one of the core functions of natural resource agencies and offices that support scientific investigations. Often, these reports contain data and synthesis related to ...

    • A standardized workflow based on the STAVIRO unbaited underwater video system for monitoring fish and habitat essential biodiversity variables in coastal areas. 

      Pelletier, Dominique; Roos, David; Bouchoucha, Marc; Schohn, Thomas; Roman, William; Gonson, Charles; Bockel, Thomas; Carpentier, Liliane; Preuss, Bastien; Powell, Abigail; Garcia, Jessica; Gaboriau, Matthias; Cade, Florent; Royaux, Coline; Le Bras, Yvan; Reecht, Yves (2021)
      Essential Biodiversity variables (EBV) related to benthic habitats and high trophic levels such as fish communities must be measured at fine scale but monitored and assessed at spatial scales that are relevant for policy ...

    • Best practices for implementing the STAVIRO underwater video protocol. [VIDEO] 

      Pelletier, Dominique; Cadé, Florent; Pearlman, Jay; Lara-Lopez, Ana; Roos, David (French Institute for the Exploitation of the Sea (Ifremer) and Oceans.mov and Ocean Best Practices System, Brest, France, 2022)
      Essential Biodiversity variables (EBV) related to benthic habitats and high trophic levels such as fish communities must be measured at fine scale but monitored and assessed at spatial scales that are relevant for policy ...